BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D07LP1|AL427004
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig198 1138 0.0
3x_Contig162 521 e-147
>3x_Contig198
Length = 1143
Score = 1138 bits (573), Expect = 0.0
Identities = 588/595 (98%)
Strand = Plus / Minus
Query: 320 tgtaattttaccatagtaaagttttgtctgaaagcacagcaagtttaaacgatccctgaa 379
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgtaattttaaaatagtaaagttttgtctgaaagcacagcaagtttaaacgatccctgaa 644
Query: 380 taaaaataccctgacacgtttagtttccacatcattttaaagcgatatttcatttcaagc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 taaaaataccctgacacgtttagtttccacatcattttaaagcgatatttcatttcaagc 584
Query: 440 tggggctctgattgctattgtttccggtattgttctgtcgataataacgggaaatgattc 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tggggctctgattgctattgtttccggtattgttctgtcgataataacgggaaatgattc 524
Query: 500 acgagtttaaaaaaaaatttctcgttgccagccgtgaagataaaaaaaaaaaaaaaaaaa 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 acgagtttaaaaaaaaatttctcgttgccagccgtgaagataaaaaaaaaaaaaaaaaaa 464
Query: 560 aaattgaaaattyatactcattatctgtgcgaattaaatacagtttttaaaggcgtaact 619
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aaattgaaaacacatactcattatctgtgcgaattaaatacagtttttaaaggcgtaact 404
Query: 620 aagatacatatccattaaagtttccacctcagaataccacaggtacgtggtacaaataaa 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aagatacatatccattaaagtttccacctcagaataccacaggtacgtggtacaaataaa 344
Query: 680 ctgttattatcgaaaagcaccaacctttctaaagctagaacctggaataagaagcagatc 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctgttattatcgaaaagcaccaacctttctaaagctagaacctggaataagaagcagatc 284
Query: 740 gaaagagtgctgtttttgtcattctttgagcgatattggcggttgagaatttttttttgg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gaaagagtgctgtttttgtcattctttgagcgatattggcggttgagaatttttttttgg 224
Query: 800 ttcttgcaaaccgctcaaaattaggctttacagaattcctaataacattacaggracctg 859
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 223 ttcttgcaaaccgctcaaaattaggctttacagaattcctaataacattacaggaacctg 164
Query: 860 tgaataatctcattactagtaaaattccaacctctgaaccgtatcaggstatttt 914
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 163 tgaataatctcattactagtaaaattccaacctctgaaccgtatcaggctatttt 109
>3x_Contig162
Length = 853
Score = 521 bits (262), Expect = e-147
Identities = 272/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 1 aaccctaaatgtttaatggttcagtagttcccgattactaccctgtttattcaatatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aaccctaaatgtttaatggttcagtagttcccgattactaccctgtttattcaatatttc 260
Query: 61 gtctacttatataagcatttaataacaccactgagctgtgctttagtatagagttgggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtctacttatataagcatttaataacaccactgagctgtgctttagtatagagttgggca 200
Query: 121 atccgttatcaattaccagtaaatccatgcattagaaacattatatctgtcctgattcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 atccgttatcaattaccagtaaatccatgcattagaaacattatatctgtcctgattcta 140
Query: 181 gattctggttccgaatctgagtttcacaattgaaaaaggtgattaactcaaatttgtata 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gattctggttccgaatctgag-ttcacaattgaaaaaggtgattaactcaaatttgtata 81
Query: 241 caataagataatatgacgcgacagtattattatc 274
|||||||||||||||||||| |||||||||||||
Sbjct: 80 caataagataatatgacgcgtcagtattattatc 47
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,987
Number of Sequences: 1807
Number of extensions: 24987
Number of successful extensions: 4809
Number of sequences better than 1.0e-20: 2
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)